tomodrgn view_config#

Purpose#

View details of the configuration specified for a pretrained train_vae model.

Sample usage#

The examples below are adapted from tomodrgn/testing/commandtest*.py, and rely on other outputs from commandtest.py to execute successfully.

# Warp v1 style inputs
tomodrgn \
    view_config \
    output/vae_both_sim_zdim2

# WarpTools style inputs
tomodrgn \
    view_config \
    output/vae_warptools_70S_zdim2

Arguments#

usage: view_config [-h] workdir

Positional Arguments#

workdir: Directory with tomoDRGN results

Common next steps#

Highly variable, see next steps for tomodrgn train_vae